@RGconner:
I have the exact same bike as you, not to jack the post, but if you could briefly explain, why does the clutch disable the kickstart? (I'm not experienced with bike trannys). It definitely does it on my bike and it has caught me off guard at a couple of stalled lights before.
Operation observation. Pull the clutch in, the kickstarter moves freely.
The how and why?
Well, the purpose of the clutch is to separate the motion of the gears from the engine.
If the kickstarter moves the transmission to turn over the engine, then the engaged clutch would prevent that.
The starter is moving parts on the engine side to turn the engine over, independent of the clutch.
Of course, the OP has bigger issues... but it would be frustrating to concentrate on fixing it when it does not matter. Free the engine, or replace it like it seems he will be doing.
Replacing it is a good option... now you can disassemble the old one properly and make it a 836 =)