I am. And I am not hating, I just don't understand the rationale with the build so far. I would want to make sure the bike runs in stock condition (close as possible) before I went making a bunch of changes to the intake, carburation, exhaust, etc.
Unfortunately when you go farther from stock to determine if the bike runs well at all it makes it harder for us to help you. As you probably know by now those CR carbs are pretty much poop for anything besides WOT- they are racing carbs after all meant to go full bore unlike street riding where you are mostly idling and staying in the 4-6k power band most of the time.
But each to his own I guess.
In hindsight the money you spent on the pipes and carbs could have been spent on things that actually affect performance- you could have ported the head and chucked a hot cam in for the money you spent on the crapy pipes and CR carbs- and gotten a pretty good performance boost.
Have you run the bike with the stock carbs in the beginning to see if the bike runs properly in the first place? Checked your timing, spark, fuel to rule all those gremlins out?