sorry missed that early morning post..
They could be replacement cases, if the numbers appear handstamped.. plus that is VERY close together with frame # Are the cases diecast, or Sandcast?
I would just get it running, ride as is..slowly polish it up.. more than that just gets costly.. untouched survivor bikes can be more desireable than a poor or incomplete resto.
Opo the shifter cover off, worst it can cost is a gasket . Early bikes did have different shift mechs, not sure when they changed, but I think the newer stuff will bolt in if you want a riding bike.. if the shaft is sticking behind the seal, better off cleaning it out anyway..