Here is my process:
I'm glad you shared that, because...
A problem I have with the vacuum gauges is that they bounce like crazy until I roll the throttle until it gets up to about 4,000 RPM. I hold it there and then adjust until all 4 read evenly. Then retighten lock nuts, and put everything back together.
You need to sync the carbs at idle, where the carb's slide position is most sensitive.
Your gauges should have come with inline flow restrictor valves which nearly eliminate the needle bounce. As you have seen, the inlets pulse the demand for air. The restrictor knobs average these pulses so you see where they pointing on the dial.
Go back a vacuum sync again at idle position.
The new problem is that it doesn't seem to want to settle back to a good idle. If I adjust the idle adjusting screw to 1100, then blip the throttle, it stays revving at about 2000 - 2300 rpm for a while, until I readjust the idle adjusting screw.
I expect you twiddled with each adjuster of the four, and have now skewed all the adjusters so that the slides can't reach their opening floor, making the idle knob loose complete control over this function.
...Or, you still have uneven vacuum sync at idle and the cylinders are fighting for dominance.
Check to see if slide can reach the floor of travel.
Tune your gauges to give you useable information at idle.
Oh, and have a fan blowing air over the hot motor, or the cylinder's will have uneven runaway cooling while stationary (which can also effect carb sync).
Cheers,