I guess I should have explained a bit better. My plan of attack would have been to strip the engine first but reassemble just the cases, jugs, head, valve covers, side covers, etc. If you were planning to replace your fasteners with an allen head kit then it wouldn't matter too much if you got some powder coat on them. Not sure if it would make the fasteners difficult to remove since they would be "bonded" to the cases. You could then have that assembly soda blasted and then PC'ed.
I searched it and one of the links was a moto forum that discussed this same thing.
http://www.allthingsmoto.com/forums/f-31/powder-coating-engines-51222/The guy did it with what looks like good results. He said you would have to go around with a razor blade to seperate the head from the jugs, jugs from the cases, etc. He says you do this "after flowout" which I'm not sure what he is referring to. I'm assuming this means after you apply the powder to the preheated parts but before baking but I'm not sure on this.
I didn't realize powder coat had a low heat limit. Seems silly since it's baked on. ha
I may be better off just going the traditional paint route but I thought I would ask around. Would be great to have something that you know will last a long time and won't fade like polished alum and won't chip as easy as regular paint.
IW