This could be due to a number of problems. I don't know about the power capability of the CB400 specifically, though. The regulator can NOT make the alternator put out more power than the field coil/stator is capable of. More stable power, yes, but not more power.
Are you using the original wiring harness/plugs? If so, you may have resistance in the wiring between the alternator and the battery. This is why I've always ran extra wires straight from the rectifier to the battery (both pos and neg).
Your ground wire looks to be adequate.
I don't know how you color coded your wiring, but it looks like it could possibly be wrong... On your regulator, "I" should go to the battery positive, A should go to the field coil, S is unused, and F should go to a "switched" source (ignition switch).
Don't ask me why they switched the letters around. Just remember that the letters can be anything but the wiring harness that they plug into will always be the same.