Thanks guys. I have the headlight wire going through an extra switch like you suggested Lucky. Now I am just trying to figure out why, when I press the starter button, I can hear the solenoid click but the starter doesn't go. When I connect the two terminals on the starter solenoid it goes.
I got one of the solid state regulator/rectifiers to replace the OEM stuff and still working through other wires. Does the green just go to ground along with the green from the alternator? I have the Clymer manual and all the greens, black and crap just goes on and on to power other lights, safety switches so I haven't become proficient at reading these things yet. Before this I have only wires up a simple Triumph chopper with not electric start, turn signals or warning lights.
I am tempted to just ignore the diagrams and wire things how it makes sense to me and then see if everything works.