Hi Scott,
The inner & outer spokes have a different bend to them at the head. If they've been installed incorrectly I would rectify it now, before going any further. If the spokes are over stressed they will break. Who did the work for you? It's hard to comprehend how they could get it wrong??
If you can't get original wheel builder to fix his error, I can recommend 'Chivo's' at Parramatta. He does a great job at a very fair price.