Yeah, my thought as well, although I kind of expected a little of it. The 836 pistons I have are also a 24mm pin height, but I didn't know the pin height on the 650's was less than the 550's until I bought the pistons. I've measured my 550 engine when I only had the head off and came up with 1mm of clearance at TDC, so I may be in the same boat with the pistons (0 clearance not too good, only the head gasket for clearance). On an interesting note, I got a set of KZ650 pistons (62mm, with a 64mm overbore available), and they have a 4.5 mm pin height. Based on the fact that Dr. Tom is using Kawi pistons at 64mm and the KZ650's are the only ones I could come up with at that size (with the same pin diameter I might add) it would be interesting to know what he did with his....the dome height isn't the big problem either, the 650's have a 4mm dome from my calcs (dome to shoulder), the 811 pistons are at 3.5mm dome, with the slightly taller pin height. So total height is only .5mm off, but the shoulder height is going to be the possible contact point.
By the way, who and where is your machinist? I've figured out how to machine the sleeves on a friends lathe, but I still need someone to do the cylinder, sleeve and upper case bores (not to mention if I need to run a little off the piston shoulder....)
And I am running 750 sleeves, the 550 sleeves would go away with a 64mm bore...
Bryan