Please forgive an outsider butting in but I've got a friend with a CB650 who's having this same issue. ;-)
First off, he hasn't been in the carbs (or the ignition, or the valves, although the air filter element is clean and in good shape) yet, so it's quite possible an obvious fix will present itself once they're dismounted and disassembled, but I'll stay hypothetical and assume his condition is exactly the same as yours.
I gather that the bike falls on its face with sudden WOT but not so much with less harsh rolls of the throttle to WOT? With that symptom I'd be inclined to suspect the accelerator pump. My Suzuki doesn't have one, but as I understand it from my muscle car days, the accelerator pump is there to provide a quick boost of enrichment for sudden throttle openings. Of course it'd be somewhat difficult to distinguish between the affects of the accelerator pump and main jets, since there's a lot of overlap there; but I'd think that if the problem is most pronounced with sudden hard acceleration under load, that you might want to give the accelerator pump another look over, especially since you've tried everything else.
If the main jets and slides/needles are indeed in good order, I'd think that's the next logical step...? Especially since I'd be hard-pressed to come up with an explanation for a *rich* condition with the stock intake/exhaust, the stock jetting, and non-adjustable needle.
I read somewhere that during dyno tuning, they sometimes disable or remove the accelerator pump somehow, so as to be able to accurately assess the main jetting without interference. Is it possible on these carbs to get the accelerator pump out of the picture temporarily and see what kind of effect that has?
Anyway, just some thoughts. Best wishes on getting this problem licked! I've just finished with a long bout of frustrating ignition and fuel delivery issues on my old (new to me) Suzy and while it's sure satisfying to have a great-running machine now, the process nearly drove me insane! ;-)