You inadvertently posted this topic in the 750 Auto section... Perhaps a modrator will pop by and move it for you-
Meanwhile, the new SS line from Slingshot, does that connect directly to the stock hard line, and are you still using the stock 3-way pressure switch?
First thing I do, is begin disconnecting the line after the MC and confirm fluid is leaving the MC. But be careful, brake fluid is exceptionally good at removing paint! Keep moving toward the caliper with confirmation of the flow. It can take a while to move the fluid through the entire line, but your method of opening the bleed screw helps.
If you've confirmed flow, fill the reservoir, tie the handle back, and let it sit a while. That may help circulate the fluid.
Also: can you confirm the piston was installed with a new seal correctly? Does the piston move at all yet? (It may not if there's no hydraulic pressure)