I screw the valve cover on to minimize direct impacts, but glass still gets in there. Leave all your valves in place the glass will clean where it is supposed to. If your worried about the mating surfaces you can use an old head gasket, but if the pressure is low like 50 PSI it will just clean off the old gasket reside. I was having my resurfaced anyway.
After you will have a fairly big cleaning job. Blow everything out with compressed air several times. Then use Kerosene to help further clean. Blow out with compressed air again.
Glass makes everything look new, but is work and messy. It is all messy.