I had similar issues when I changed to LED signals on my 75 cb550. I also installed new gauges at the same time, and the new speedo only had one bulb for the turn signal indicator. This caused all four turn signals to come on at the same time because the current would pass through the indicator bulb and carry over to the other side. So I had to wire in a diode on each side so that the current would only flow in one direction. The LED's don't do this on their own, not sure what RodPlunger's talking about.. All of my new signals were two-wire units, a black wire and a black/white wire. Typical bulbs only need a positive and a negative, so it shouldn't matter which wire does what. Although I think I used the black/white for all the positives. Maybe I just got lucky.
Anyway, got the diodes in and had each side working independently from the other, but now they wouldn't flash. So I installed an EP35 electronic relay from AutoZone and everything works perfectly. Well kinda, it seems the relay doesn't turn off. The lights work as they should but when the signals are off you can still hear the relay clicking. This just happened today so I've yet to figure it out.
If none of this helps I would also make sure the front's are wired to the switched positive wire and not the constant (running light) wire, make sure the battery is fully charged, and take 30 mins to clean up all the wiring connectors around the bike. Seemed to make everything smoother for me.