OK, I got a little collar and a 12x55x1.25mm thread bolt at Ace and made an adapter to fit my genuine Harbor Freight (free to me!) dent puller. Then I threaded it into the primary shaft and [gently] tapped it out. The oil in the spline inside the primary drive clutch assembly was "wet" and it slightly rusted those splines inside there, made it stick a little bit. Got all the other parts stripped from the bottom case to go into the other [bottom] case, still have to do the upper case, dowels, drains, caps, plugs...bearings.
The new crankcase has all "B" size crank holes where the old one was all "A" size, might or might not be a show stopper for parts, will check tomorrow. Sometimes the ID of the cases were borderline and if that's the situation, will install the "old" ones in the "new" crankcases, because they only have 2000 miles on them(!). It all depends on the crank journal actual sizes, will see tomorrow.