Ok so after trying my hand at wiring and electrics. I still cant find the dead short. Main Fuse is still popping as soon as Ignition gets turned. I've done it all. Even tried to see the spark in a darkened room and I still couldn't see the light. Only the warm glow of a fuse heating up and then...Darkness.
Come now, you've done so much by yourself, you can solve this too! A little logic and process is all you require...
From battery POS, RED wire traverses the Main fuse, then goes to key switch. At the key switch,
Red transfers power to BLK, BR and BR/WHT
If simply turning the key to position 1 pops the Main fuse, you are grounding out the RED wire between the battery POS and the key switch. You need to insure that the power being sent to BLK, Br, and BR/WHT is not being tripped. Pull the fuses for those colors (stock has Br and Br/Wht) and turn the key. Does the Main fuse pop? If so, then your issue is on BLK circuit. If not, replace 1 of the Br circuit fuses and test again. Pop? No? remove Br, and replace Br/Wht. Pop? Yes? Now trace that circuit.
I suspect the problem is along your BLK. It leaves the key and heads towards the handlebars. If you have inadvertently tied stock BLK to a device ground (industry standard is BLK=ground, except in Honda its switched 12v) then you'll find your problem.
This is why I always re-wire with BLK through its own fuse. Not because it requires it from a current draw, but because when you blow a fuse due to a device ground, it kills the MAIN fuse. Dead bike
Another way of doing this is: key OFF. Check with your meter for
continuity to ground on these 4 colors
from the KEY switch. None should have a path to ground. You can do it from the harness connector of the key switch. This method saves you blowing fuses...
Spend 15 minutes, and you'll find it. Meters don't lie. And they have X-ray vision