Paint got time to harden since I painted in July 2012, assembled the engine several months later.
Here a photo of how the case looked before repaint. Whats left of Honda's paint. I did not paint the cases in the 80's despite I pulled engine several times that decade. I think the paint left mostly when sitting in a barn for 19 years.
Good thing with the way I did it is that some axes can be left in cases when washing it. If beading the surfaces all holes must be plugged and no gearbox or other stuff still mounted. Save some $$ too. Hard corrosion can be brushed off.
I used Caustic soda to clean my hubs and valve cover.
It loves aluminum oxide! Bucket with a few liter of rather strong solution, 2 dl caustic soda in 3 L if I remember correctly. Part in bucket (outside for fresh air and not gas people!) use a dish washer brush and work the solution all over the surface. It react hard so use glasses and long sleeve rubber gloves. The corrosion will turn to black, let it work for a few minutes. Not too long, check after 2 minutes. Leaving it for hours can make the part to dissolve completely

I have heard stories about missing heads and cases only steel thread parts left

Rinse with water and remove the blackened corrodes surfaces with steel wool. The surface will turn to a nice old aluminum grey that can be polished further. The heavy alu corrosion disappear very quick and easy.
Photos to show and encourage others.
Note! covers only cleaned with caustic soda and water, finally steel wool. Not sanded at all. The sanding tool on phote for something else.