Alright after getting the carbs leveled (put some wood under the front tire) 
http://i71.photobucket.com/albums/i139/bssv/carbgas003.jpg(not my image) 
but the float heights for 1&2 were about 1-2MM under this 
3&4 float heights were about 2-4MM. 
since the exhaust for 2&4 are cooler think it's safe to say it's not the float heights? 
The bike fired right up again with these heights I was able to set the timing with a strobe light and after about pint or so of gas the bike shut off. I tried to get the bike running again but I think the battery is just too weak to start it up (11.7) last time I checked the multi meter so I pulled the battery and have it on a tender for tomorrow. 
Once the bike is running again I'll test the jet pilots, since 2 & 4 are still not as hot as 1 & 3. (floats will get adjusted later when I pull the carbs again) 
this time around I was able to keep the bike idling without any sporadic revs and was able to rev the bike up over 2.5k RPMs with it coming back down to idle (note: choke was on 95% the whole time, one problem at time) 
Any other things that would cause 2 & 4 to be cooler? other than pilot jet and float heights? 
EDIT: 
I also switched out to brand new plugs. (the 2 & 4 issue was occurring with the old plugs also, all 3 of them were gapped to spec 1 was a little wider. All of the new plugs are gapped to spec)