Everything looks correct except that rotor. I'm not even sure it's made by honda. If it is, it's from a '80's or newer bike...if everything lines up right, should be an improvement. Caliper is stone simple. You most likely only need a caliper piston seal, if even that. I almost always re-use 'em. The master cylinder is a #$%* though. I generally just replace them. David Silvers Spares sells a nice repro for only slightly more than a rebuild kit or grab just about anything off ebay will work.
