I suspect your going to fall into the trap that a lot of people fall into, namely, just throw money at it in order to cure a problem. A lot of the time this is not needed and can in some cases make matters worse not better.
Genuine Honda throttle cables for the 500/550 are getting harder and harder to find these days, there are loads of copies out there that look the same and are a lot cheaper. They are cheaper because they are constructed cheaper in most cases. A genuine Honda cable will have a Teflon sheath around the braided wire inner core, an aftermarket copy generally doesn't, not say always doesn't but I can't remember ever seeing an aftermarket copy with the Teflon sheath on the inner cable, they may exist, if so please post a link to where to buy them from.
Over time this sheath starts to dry out, contaminates and grit makes there way into the cable etc, this makes the inner start to drag against the outer, in the past people would oil the cables but this made matters worse, the Teflon reacted to normal oil by swelling, this caused more drag and eventually people would just replace them, usually with cheap copies. If you disconnect your cables and pull the inner out as far as it will go you'll see the Teflon sheath if it's a genuine cable, the inner needs to be fully out though as it starts around an inch or two above the nipples. No sheath and you have aftermarket cables fitted and these are not exactly the best in the world. However you can oil these so it's not a total loss. If they are genuine you can still oil them IF you use silicon oil, the Teflon sheath does not react to silicon oil as it does to mineral oil. I would remove the cables entirely, hang them on a door so they hang nice and straight and just dribble silicon oil into the chrome fittings on the top of the cable. You'll see it come out of the carb end of the cable in an few minutes or so. Work the inner up and down, see if you can feel any snagging, most cables get worn through against the frame, this not only allows the new oil to get out but also allows crap to get in, so check the cables before oiling to see if you can see where it's worn through. If it has maybe use some insulating tape to seal it up whilst you oil the cable. Afterwards you can protect the cable by splitting some fuel line and putting that around parts of the cable where it touches the frame.
By far the biggest cause of drag on throttle cable though is incorrect routing, Honda knew this and issued cable and wiring diagrams in order for the mechanics doing PDI and building them out of the crates to route the cables correctly. The 550 has a diagram in the 500/550 addendum, which I believe is available on the site somewhere but just in case it isn't I would suggest this. Remove the cables from the R/H handlebar switch entirely. Remove the throttle tube with it's rubber grip, oil/grease the handlebars and slide the throttle tube back on, spin it by hand until it feels really free. Then refit the oiled cables, thread them over the top yoke, they pass through the gap in the speedo/tacho bracket and then pass around the headstock on the left of the frame, around the outside of the frame member, below the rubber mount for the tank and pass through the frame where the coils are mounted, above the coils obviously, a small ziplock is used to hold the cables against the frame just as they exit through the frame. They then attach to the carb bracket. Check before attaching that they move freely, they should feel like it takes to effort at all to move them back and too.
See if that helps with the feel of the carbs, it costs next to nothing to do and should only take a hour or so.