I have been working on an '82 CB 650 for some time now. I picked up the bike after it had sat for (allegedly) two years, having ran (allegedly) just fine when it was parked. I've since:
--meticulously cleaned the carbs, which have stock jets (and a stock airbox to go with them). I had all the jets I could find pulled and soaked in carb cleaner, and used 2 cans of carb cleaner to clean every orifice I could find.
--Installed a new battery
--Rebuilt the top end, with all new gaskets, rings, and intake/exhaust valves. The cam chain tension was adjusted and valves set to tolerance when I did that. The engine doesn't leak any more oil, which is an improvement! I decided to do this because the compressions were 30/30/60/60, but that was based on a cheap HF compression tester so they may have been higher. Either way, they must be well within spec now. I'll check them again once I break in the engine more.
But, here's the problems I have had since I got the bike to run after cleaning the carbs, and these problems remain after rebuilding the top end:
--The air coming out of the left side exhaust (cylinders 1 and 2) is cool--the headers are too hot to touch, but the air coming out of the muffler is pretty cool--almost ambient temperature. The right side is much warmer, and feels like what I imagine the exhaust should feel like.
--The bike falls on its face above 5000 RPM in gear. In third gear that brings me to about 50 MPH top out speed. Above that, it stumbles and bucks forward and backwards. It won't let me do anything above about half throttle.
--In neutral, I can blip the throttle but the RPM will "hang" before it decreases again.
--The bike pops and spits real bad out of the exhaust. It's not a nice smooth deceleration by any means.
--Once the bike is warmed up, it dies at idle. Which is fun, riding around trying to keep the RPMs up as you decelerate...
Whether or not these are related, I'm not sure. But I don't know where to look next.
Also, I have good spark on all 4 plugs. And I have found that depending on the day, I can remove either the #1 or #2 spark plug lead and the bike will continue to idle. Which is probably good for fuel savings, I would imagine.