The choke creates a vacuum at the venturi, just by obstructing the intake side of the carb.
That vacuum pulls fuel up the main jet for a rich mixture.
I'm not familiar with your carb stack. But some models have a throttle advance cam coupled to the choke mechanism. This is on the #1 carb, a little mechanism coupled to the choke shaft with a short rod. There is an adjustment for how much throttle is added along with the choke closure. That gives a high RPM idle when the choke is applied - keeps it running while warming, and is a good reminder if you leave the choke on.
If you alter the relationship between the slide lift arms and the throttle shaft, this affects the choke cam function. It's a bit of a dance to get the lift arms, idle screw, and cam to work properly. Unless the lift arm "sync" adjusters are pretty close to what Keihin set originally, the cam may not be adjustable to get much throttle advance or, conversely, can make low idle impossible.
If yours doesn't have that throttle advance cam you have to work the throttle along with the choke to keep it running until warmed up a bit.