Apparently turning the stop screw (by taking the clutch cover off) will adjust the range of engagement. I am going to play with adjusting this screw tonight and report back. Please do the same if you have time to mess with it.
-keith
Ding, ding, ding! That's exactly what I was talking about.
keepitrunnin,
Now that I am home (posting from work earlier, don't tell my boss) I had some time to go outside between thunderstorms and look at it. I am about 90% certain that you turn the screw counter clockwise. If someone remembers, hats off, my memory isn't that good as this isn't something you do very often. The I did this on my 400 (they work the same) and what I did was sit on the bike with it running and the lock nut loose and make a small turn one way, put it in gear and see how it felt. There really isn't a magic formula for this since you are now adjusting not only for proper operation, but for personal preference. I personally like my clutch to engage about .5" to .75" from the bar. Consequently I have to pull the lever a fair way to shift, but that is how I like mine set up. (and yes I know this will cause my springs to wear out faster, but they are cheap and relatively easy to replace.) You are just going to have to make small changes until it feels "right" to you. This isn't a particularly complicated job, you only need a phillips screwdriver, flat screwdriver and a 10mm socket and about 30-45 minutes. And you aren't going to mess up your clutch unless you back that adjusting post all the way out. If you stick to 1/8 turn increments, you will only be moving the engagement just enough to notice that it has moved but not enough to prevent your clutch from engaging/disengaging properly, if you accidentally go the wrong way, just turn it back.
Also, I don't know your mechanic, or what he did. If you know and trust him, then 9900 would be a bit premature for the fiber plates in the clutch pack to wear out, though not impossible. I would plan on ordering a new clutch cover gasket on your next oil change, just so you can open it up and pull the clutch pack to inspect it.