I don't know about the 750s, but my 550 has a breather seperate from the gas cap itself. This is 1/8" sized hole that sits behind the gas cap. I've also got an overflow tube that leaves the tank just above where the tank sits on the frame.
Yes, you can create a slight vacuum in your tank. Yes, this would create the symptoms you've described. Yes, a partially clogged breather could still cause these symptoms. Do you hear a swoosh sound when you open your gas tank to fill it after riding for a while?