I think a lot of it has to do with the rider, not in the sense of who's the better rider, but instead with the size/weight of the rider.
My buddy Charlie and I get comparable speed/performance out of the same bikes, but Matt is consistantly slower on any bike, Charlie's slightly taller and maybe 15lbs heavier than me,(I'm 5'6" 145lbs, and LOOK 20lbs lighter) Matt on the other hand is a foot taller, and 80lbs heavier. More weight and bulk=more power needed to move at the same speed, the extra bulk means a bit more air drag.
By way of example, my old ranger longbed 4x4 with a 2.3 4 popper with the tail gate up would cruise comfortably at 65mph, with the tailgate down and windows up the comfortable cruise moved up to 75.
ken.