Perhaps, this will help. With a carb for each cylinder, you've got 4 engines interconnected with a common crankshaft. It's going to run the best and smoothest when each of those engines behaves just like the others.
I have not sychronizied the carbs yet, hope to have someone look at it this Saturday with a manometer. When I did re-assemble the carbs I was quite sure they all were set the same and pulled the same.
Mechanical alignment of the carbs is a great starting point. However, you do you know that each cylinder is drawing the volume of air? This is why a compression test is helpful. Also, very small differences in slide openings are very significant during very low settings of throttle.
I did not check the plugs yet.
This is your window on what is happening during the combustion process. And, combustion residue can tell you if you are getting too much or too little fuel for the task.
Have not checked the compression yet.
You can never get carb adjustments to solve a mechanical cylinder deficiency.
Am not sure about the spark advancer. It looks like it just needs to be checked to make sure it is clean and tight. There does not appear to be any adjustment according to the manual. Perhaps I am wrong on this.
You simply need to check for operation with a stroboscopic timing light, to verify advance with increased RPM. Also, helps to verify that the static timing was done correctly.
I also am thinking that the floats are not all set the same. If they were not close to each other on their tolerances would that be a problem?
Theoreticaly yes. But, I wouldn't think it would be as severe as your trouble description reads. But, if they were off far enough...
Is it possible that the drilled passagways in the carb bodies may still have flow restrictions? These route both fuel and air. Just a thought.
Also, how confident are you that your freshly cleaned jets didn't get plugged with new contaminants? The slows are only about .016 inch in diameter. Chunky fuel won't fit through that.