What headlight did you put in? These charging systems are close to being completely taxed from the factory. If you added a higher amp-pulling headlight you're taking juice that would otherwise be used to charge the battery and using it to run the headlight. If it's the bike in your avatar that you're talking about, looks like you've already got some extra lights on there with the tour bags.
Might invest in some LED replacements for all of the brake and running lights to reduce the pull on the electrical system. Also, make sure all of your connections are clean especially the ones from the stator, regulator, and rectifier.