Ok, boy am I glad I ordered those new coils. I was just out testing and the coil for the two middle cylinders is not working no spark to the middle two plugs at all. After messing and testing it seems it has gone bad and is probably the root of all my troubles at least I hope so. I ordered the parts last Monday so hoping they get here soon! I will update once I have the new coils in since I do not have any backups.
Fingers crossed!