Nope, sounds like BS to me. I would be very mistrustful of a seller telling you that.
I removed and replaced my airbox and pods several times, and it never made much of a change at idle at all. In fact, when I was done jetting for pods, the pilot jets remained stock. See the thread in my sig below.
Did you ever hear of a car idling poorly when you removed the air cleaner? I never have.
In fact, possibly the only issue I had with pods, once rejetted properly, was that the bike was a little hard to start when ambient temps were below 40F. I had to leave the choke on longer when temps were <40F, too.
I've got to agree with tramp, if this were the only problem, why wouldn't they just put it back on and ask for more money? Also, why did the seller take it off in the first place?