In order to run them on the outside you will need to make a cutout in the control casings for the wires to come out of. As for disconnecting them, the connections should be in the headlight bucket, assuming PO didn't make and mods in that area. I recommend finding a color wiring diagram, and marking each wire. I can rewire one of these with just the diagram, but it took me 3 days of staring at it and dispair that I'd ever figure it out to do so
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Some info on this bike, a lot of the parts don't have a grounding wire as it uses the frame as a ground. I put some nice plastic coated handle bars on mine without realizing this and was really frustrated when the electric start suddenly wouldn't work
Have fun with your bike, looks like a good one!
Brandon