So got a few things sorted out last night. Lots of little adjustments are popping up, but as I work this stuff out it should all come together.
I am now having the opposite problem that I had when I took it off the road. Before my clutch was just slipping, now the clutch is not completly engaging so even with the clutch lever pulled in it wants to pull itself forward just a little. I think with the last tweak of the clutch cable I got this sorted out but I'll know for sure when I get it out again.
My rear brake pedal needed adjustment as there was too much free play, this was a simple fix once I found the adjustment screw hiding under the pedal/frame.
In terms of running its still pretty rough. I'm getting a lot of back fires but I think this is pretty much down to the fact that the carbs need to be synced. I'll pick up a long length of fuel line so I can do this ASAP (my Morgan Carbtune is feeling like a good investment).
I adjusted the cam chain and that made a huge difference in the sound. It was obviously way too loose before and making all kinds of loud noise.
Question:The other thing I noticed is the forks are really soft. I have what I'm pretty sure is an 81 CB650C front end, I don't remember exactly, but the manual called for approx 230cc of fork oil. I used 10w fork oil and also topped them off with about 13psi of air. I'm worried that if I hit the brakes hard the forks are going to bottom out far to easily, they really are quite bouncy. Any suggestions? Maybe I should try some heavier oil?