On mine I just have the hose from the cam cover open to atmosphere, behind the left-hand side panel. If you are missing the bottom part on yours, it's pretty much the same as I have anyway. Some put a small K&N type filter on the end, some fit one where it exits the cam cover. In my experience, it doesn't affect the running whatever you do. If you are into cleaner emissions though, you might want to try to source a new one.