On the (above) topic of fuel lines: how are they routed? They should be almost horizontal from the petcock to the tees, passing through the holes in the carb's mount bracket enroute. If they are running in other directions (like down below the float bowls along their path) then when the trapped air bubble(s) in the line(s) get hotter, they tend to restrict the incoming drainage.
Also, try this: adjust your air screws a tiny bit, either in or out, and try the ride again. They should be in the range of 7/8 to 1-1/8 turn. It often does not take but 1/16 of a turn to make a noticeable difference at the RPM and speeds you're talking about. This has become especially true with the alcohol (ethanol) enhanced fuels, which burn a trifle slower (and cooler) than the gasolines of the past.
During the last 6 years here in Colorado, for instance, we have gone from ethanol (10%) in the winter to 10% plus hydrogen, all year around. It made a very noticeable flat spot appear in my own 750 at 4500 RPM (when pulling hills, of which we have more than a few...) until the engine gets fully warm (10 minutes minimum).
