The head and valve cover bores on my cb400 are slightly scored as well. When I asked the machine shop who did my valve job and rebore about this slight scoring and how it would affect engine longevity, he indicated that if the scores we're not deep enough to catch a fingernail and it was meeting the camshaft within tolerance, it would be fine, just keep up on your oil changes. He said my options were to live with this head or shell out 4-600 on av NOS head (yeah, as if you could fine one of those!)
He did indicate that it was possible to machine out bores to fit a bearing shell, but you are talking some serious fabrication work here, and very expensive, also a specialized machine shop with the right equipment and know how on these things.
Have you any pic's of your scoring? I'll bet some of us could relate it to our own cylinder heads and tell you if we would ride on it.
One last thing, my machinist also said, if it made me feel better, I could VERY VERY VERY lightly buff out the bores with a light grade scotch brite pad. again, the word here is VERY LIGHTLY, or you'll do more damage.
I'm running mine on what it is, that'll be me changing the oil every 1000 miles or so, which is OK, saves on gas bills!
