Hi Phil
On my CB750 I painted the crankcases because I wanted an original finish, to do this I had to clean off all the old paint and oxidisation, this was quite a job, wouldn't really like to try and clean it regularly if I had left it bare. The paint is not only there to look pretty it is an anti corrosion measure.
Depends really on what pleases you, if you are going to paint or leave it bare you have to clean it off throroughly any way, if after you have cleaned it you like the look then leave it bare, maybe go for a paint/bare finish, paint the out of the way places and leave the bits you can see (and get at to clean) bare. Whatever looks good to you.
Cheers
Den