Rob,
If I'm not mistaken, the "kit" alternators suppiled by Honda, Kawasaki, Yamaha, Suzuki, etc, for their Superbike & Supersport models are permanent magnet single phase alternators?
Smaller and less rotating mass as they only have to cope with powering the ECU & injectors on a race bike. You would need to check that the output could cope with your required load.
You can easily check whether they are single phase or three phase, by how many wires go to the regulator/rectifier.....two wires = single phase, three wires = three phase.
Obviously three phase is more efficient, but is not necessary on a race bike (at least without lights).