Has anyone ever tried using the original rubber intake boots, covered with filter material? That should provide the factory intake contour, but without the troublesome airbox. Then you could start trying out bigger main jets. I'm going to dig mine out of the parts box and give it a try today.
Dannyeven, I have Emgo pods with 105 main jets and stock 38 idle jets in my PD46A (X46A) carbs. Idle is perfect, but there is a "flat spot" at middle RPMs (this is a problem with stock induction as well, but worse with pods, on my bike). The engine runs really hot with jets smaller than 105. Timing can't be set properly, but that may be a separate issue.
I started using pods as a means of reducing the time and trouble in removing and refitting the carb rack during last winter's work. Also, there are a few parts missing from my bike's original airbox assembly. Several of the most knowledgeable people on this forum have a very low opinion of pods, and Tintop's stack/filter system is not cheap (though extremely cool-looking!). I suppose I use them because my bike was an assemblage of odd parts when I got it, and I have no interest in restoring it to factory appearance. The simplicity of pods appeals to me, too. Time and experimentation will tell. If you find that your engine runs hot, try bigger jets and change the oil often. Otherwise, do as the wise ones say and put the stock airbox back in the bike!