Then record the voltages at 1000 RPM increments up to 5K.
Just to be clear for the Next Test...
-Is the RR plugged when I perform this test? I'm assuming yes.
-Which Black and Whire wires from the RR should I record the voltage from at 1k RPM increments? The big plug (white, black, yellow(3)) or the smaller plug (Green, White/Red, Black)??
You will be checking the system (or regulator) while it is working configuration. Yes, everything will be plugged in. You may need extra jumpers to access some points of the system with probes. Either that, or component substitution with known good, or continued guessing...
The plug that contains the yellows (Alternator output), also has the rotor or magnetic field coil wires. The voltage on the field coil wires determines the output strength of the alternator. Higher voltage on the B & W make the yellows put out more power.
If your battery is still not being charged, your regulator may not be passing voltage to the alternator.
It is a process of elimination. You have checked the rectifier and found it good. You have corrected the field coil connection to the regulator.
Now you need to know if the regulator is still performing.
Or you could check the yellow wire connections to the rectifier. If you find the same high resistance indications that you had on the black and white wires, that can be cause for failure, too.
The regulator and wiring are the last major components of the charging system that you haven't "proven" with test devices.
Alternator rotor -- √
Alternator Stator -- √
Rectifier -- √
Connection from slip rings to regulator -- √
Regulator -- ?
Connection from stator to regulator -- ?
Connection from key switch to Regulator -- ?
Connection from Rectifier to Battery -- ?
Once you have checked all the system components and assembled them into a system, it must work as it did originally.
Physics demands it.
No hand waving required.
Cheers,