I've not used Yamaha carb cleaner, so I can't answer your question directly. Perhaps I can help you figure out just what the residue is.
I think it's important to determine if the white residue is a chemical precipitation, or the carb metal corroding.
Simple test: squirt some carb cleaner in clean glass jar and allow it to evaporate. Is this residue white? If so, then the white deposits are chemical residue from the chemical itself, and you need to flush them off the cleaned parts with another solvent of some type. I would try mineral spirits if I wanted completely dry carb bodies (before painting), or Kerosene that leaves a slightly oily film over the remaining surfaces to delay corrosion of the base metal. If you use water, then follow that with WD-40 to prevent metal corrosion.
If the cleaner dries clear, then the white residue you see is possibly the carb metal corroding. Either during or after the chemical contact. If it occurs after the chemical has gone, corrosion could be occurring upon exposure to a humid atmosphere. A thin anti corrosive barrier that shields the metal would be indicated. Perhaps a kerosene or Diesel fuel secondary bath?
If the white residue is actually forming during the chemical soak, the chemical could be slightly corrosive to the metal, or behaving as a catalyst for the corrosion. In either case, reducing the exposure time seems a reasonable preventive approach.
Good luck!