Your limited description would lead me to suspect carbs. When you cleaned the carbs, did you also inspect thoroughly the gas tank? Is there any rust inside there that may be sending some debris to the carbs?
Do you use an inline fuel filter? A quick check would be to unscrew the bowl drain and see if fuel is coming from each carb. If you really want to be thorough, you could capture the gas retrieved from each carb to verify the fuel level per carb (bike on center stand).
Top of my head ideas...