Dual Output coils should have coils of wire inside wired as depicted below.
The simplified drawing does not show secondary resistors which can be in the plug caps or the spark plugs. The stock bike had resistors in the plug caps.
The red coil is the primary where one side is connected to 12V power and the other is connected to contact points and a capacitor/condenser. Closing the contacts charges the coil. Opening the contacts, with the aid of a capacitor, rapidly discharges the coil. When the charge collapses it makes voltage in the Green coil, creating spark in the gaps of the plug.
You can measure the powered off resistance of the internal coils. The red primaries should measure in the vicinity of 5 ohms (unless 3 ohm coils are employed). The green secondary coil can be in the 15,000 to 13,000 range or thereabouts. (Aftermarket coils can be made different from stock and should be specified by the manufacturer) If you can get these measurements and neither coil has continuity to any other protruding metal bits of the coil. The coils should fire.
If the point contacts don't make clean contact, the coils won't charge and you get no spark. If the capacitor/condenser doesn't provide the proper aid to coil discharge, the coil may not spark the plugs.
Now you have the information to determine why your bike isn't making spark, provided you can verify the coils are well connected to 12V.
Cheers,