+1 to weltzing's question, what was the reason for the change if the others were working?
Also, pull the plugs on each cylinder and see what you can find. The bluish smoke sounds like oil burning for some reason. Check for spark on the plugs, although if all 4 headers are warm I'd imagine they are all firing.
Start from the basics, have you done a full tune up like the manual says? I know it's super annoying to hear it, but do that. i once spent 3 weeks chasing down a "coil" problem only to find out I'd hooked the gas line up to the breather tube on the carbs, so 1-4 were getting plenty of fuel and overflowing and 2-3 were dry.
Do the tune up and report your results, along with the original reason for the coil change, and I'm sure we can sort it out.
Brandon