Hmmm...now you've confused me...
Check the ohms, like you have, between Bk/Wht and Yellow (or Blue), should read 4.4 to 4.8 ohms on the 500/550 coils (400:1 winding ratios).
Remove the sparkplug caps, then check from one spark wire to the other (like #1 to #4, or #2 to #3). It should fall into the range of approximately (4.6 ohms x 400)=1800 or so ohms max, give or take a couple hundred ohms. The usual failure mode is a broken wire inside one of the spark wires, at the coil inside the molded-in joint. It is exceedingly rare for them to short turns, which will make the reading less than, say, 1200 ohms, but I have seen it twice in these 40 years. The latter shows up as no spark after the coils are hot, while the former shows up as no spark at all or else very marked cold-bloodedness until the engine is well hot (and nasty in the wet!).
But, ALL these tests are done without power, and with the wires disconnected from the bike. RS meters are also notorious for their inaccuracy: even the $2 Harbor Freight meter is better than most of the RS meters I have had or used, when measuring ohms.