There will also be a number on each rod: this is their weight, if you want the smoothness back. These match the crank weights at each journal.
The damage you describe to the top end and cam chain tensioner point to use of too-light oils in the engine at 29k miles. When rebuilt, use 20w50 oils. You will find that unless they have been replaced, the valve guides will have between .0050" and .0080" clearance and need to be replaced, too. APE makes excellent guides for them.
Be sure to get a new cam chain while you're at it: it will be worn, too.

And, check the top plate in the clutch: it has slant-cut corks and they might be loose on the steel plate. And the rivets in the dual-steel plate in the clutch pack, which will be either the 3rd plate in, or the 2nd from the back (if in stock locations) might be loose. There's several 'fixes' for this one.