28mm. That's what is in both my sets of 550F carbs, 069A. Not the original owner so I can't be sure that's how they came, but they are original Keihin jets and it'd be too much of a coincidence to have three sets of carbs with incorrect jets.
Not sure why Jets-r-Us has 32mm. Maybe someone else will chime in. Can you post a photo of the 32mm one? The one on the website looks like the top part is the same length and it just sits deeper in the float bowl...