The Clymer simply copied what the Honda manual said and published when the bike was first manufactured.
Since that time, NGK discontinued the D7ES and replaced it with a D7EA, which is a nearly identical plug, intended for use it the CB550, as well as other bikes where the D7ES was previously specified.
My Cb550F2 (still in stock configuation) will also carbon foul the plugs if I spend too much time operating with the choke on, at low throttle settings, and don't take it out on the freeway to get the bike and combustion chambers up to full temp for a good long duration (about 15-20 minutes). Then all is well, plugs come out tan.
It will also foul plugs with greater frequency when the air filter is dirty.
The air screw settings for the F2 are different than other CB500/550s, and they are more sensitive to setting changes. They should be close to (or even a bit more than) 1 1/2 turns insteads of the 1 turn that other models have as settings with similar carbs. This may also account for your sooty plugs if the mech that did the carbs looked up the wrong data for the carb setup. Of, course if this is wrong on your bike now, who knows the extent of other changed made to the "tuned" carbs you have now.
Lastly, changes to stock exhaust and air filter may have a greater effect carb tuning. Since you didn't say, I assume you still have the stock configuration.