Update: The engine is back together and in the bike. I ground down the bottom front mount flange before fitting the engine. OMG it made it soooo much easier to install. I'm glad I didn't bother with the frame kit this time. I still may do it in the future, but I don't feel right about cutting a good frame and sacrificing frame rigidity. I ride pretty hard into turns when I'm in the mountains.
Ok so just a few more bits to attach and I should hear it fire tonight.